EMP observation tables, metadata, and other data are available on the Qiita EMP Portal and on our FTP site.

Content on the FTP site includes:

  • file describing data
  • EMP Sample Type Ontology (EMPO)
  • Mapping files
  • OTU observation tables
  • OTU information: sequences and trees
  • OTU distribution tables
  • Results: alpha- and beta-diversity


EMP-related code, analyses, and issues are on our GitHub repository.